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Applications & Compilers
Applications and Compilers
Applications
- Vasp
- Quantum espresso
- CP2K
- Matlab
- Wien2k
- SILVACO
- Miniconda 2 and 3
- CNVnator
- ROOT
- WRF
- SBDART Model
- ROMSAF
- WACCM
- NCL
- RT Model
- Schrodinger
- Gaussian
- Lammps
- Gromacs
- SciLab
- ANSYS
- Molpro
- AIIMS
Tools
- All Paths
- Celera
- Ray
- SSPACE
- Velvet
- Velvet Optimiser
- Trinity
- SGA
- SOAP denovo
- SOAP denovo-Trans
- Edena
- Trans-Abyss
- Oases
- Cap3
- CNVnator
- Annovar
- Annocript
- SPADES
Assemblers
- All Paths
- Celera
- Ray
- SSPACE
- Velvet
- Velvet Optimiser
- Trinity
- SGA
- SOAP denovo
- SOAP denovo-Trans
- Edena
- Trans-Abyss
- Oases
- Cap3
- CNVnator
- Annovar
- Annocript
- SPADES
Compilers
- OpenMPI
- MPICH
- Javac
- Cmake
Interpreters and Runtime Environments
- R
- Python
- Bio Python
- Bio conductor
- Perl
- Bio Perl
- Java
- Numpy
Scientific Libraries
- LAPACK
- BLAS
- FFTW
- SCALAPACK
- HDF5
